Search results for "methods [Diffusion Tensor Imaging]"

Illumina-based RiboMethSeq approach for mapping of 2'-O-Me residues in RNA

2016

International audience; RNA 2'-O-methylation is one of the ubiquitous nucleotide modifications found in many RNA types from Bacteria, Archaea and Eukarya. RNAs bearing 2'-O-methylations show increased resistance to degradation and enhanced stability in helices. While the exact role of each 2'-O-Me residue remained elusive, the catalytic protein Fibrillarin (Nop1 in yeast) responsible for 2'-O-methylation in eukaryotes, is associated with human pathologies. Therefore, there is an urgent need to precisely map and quantify hundreds of 2'-O-Me residues in RNA using high-throughput technologies. Here, we develop a reliable protocol using alkaline fragmentation of total RNA coupled to a commonly …

Calibration of advanced Virgo and reconstruction of the gravitational wave signal h(t) during the observing run O2

2018

In August 2017, Advanced Virgo joined Advanced LIGO for the end of the O2 run, leading to the first gravitational waves detections with the three-detector network. This paper describes the Advanced Virgo calibration and the gravitational wave strain h(t) reconstruction during O2. The methods are the same as the ones developed for the initial Virgo detector and have already been described in previous publications, this paper summarizes the differences and emphasis is put on estimating systematic uncertainties. Three versions of the h(t) signal have been computed for the Virgo O2 run, an online version and two post-run reprocessed versions with improved detector calibration and reconstruction…

SM identification of approximating models forH∞ robust control

1999

Set Membership (SM) W, identification of mixed parametric and nonparametric models is investigated, aimed to estimate a low order approximating model and an identification error, giving a measure of the unmodeled dynamics in a form well suited for H, control methodologies. In particular, the problem of estimating the parameters of the parametric part and the H, bound on the modeling error is solved using frequency domain data, supposing lbo bounded measurement errors and exponentially stable unmodeled dynamics. The effectiveness of the proposed procedure is tested on some numerical examples, showing the advantages of the proposed methods over the existing nonparametric H, identification app…

Biopsy vs. brushing: comparison of two sampling methods for the detection of HPV-DNA in squamous cell carcinoma of the oral cavity

2012

Background: HR HPV infection was proposed as aetiological factor of oral squamous cell carcinomas (OSCC). HPV frequency in OSCC is highly variable, due to the discrepancy in oral sampling procedures, HPV testing methods and inclusion criteria regarding tumour site (strictly oral cavity vs. nearby structures). Our aim was to compare HPV DNA frequency and type-specific distribution in paired cytological and histological samples of SCC strictly located in oral cavity. The correlation between HPV detection rate by each method of sampling and demographical, behavioural and clinical-pathological variables was also examined. Patients and methods: HPV DNA was detected in brushed cells and formalin-…

Non-LTE radiation hydrodynamics in PLUTO

2019

Modeling the dynamics of most astrophysical structures requires an adequate description of the radiation-matter interaction. Several numerical (magneto)hydrodynamics codes were upgraded with a radiation module to fulfill this request. However, those among them that use either the flux-limited diffusion (FLD) or the M1 radiation moment approaches are restricted to the local thermodynamic equilibrium (LTE). This assumption may be not valid in some astrophysical cases. We present an upgraded version of the LTE radiation-hydrodynamics module implemented in the PLUTO code, originally developed by Kolb et al. (2013), which we have extended to handle non-LTE regimes. Starting from the general freq…

BVI photometry in NGC 6611

2007

VizieR online Data Catalogue associated with article published in journal Astronomy & Astrophysics with title 'Correlation between the spatial distribution of circumstellar disks and massive stars in the open cluster NGC 6611. Compiled catalog and cluster parameters.' (bibcode: 2007A&A...462..245G)

The contribution of colour and spatial frequency cues to contour integration

2011

Expansion cone for the 3-inch PMTs of the KM3NeT optical modules

2013

[EN] Detection of high-energy neutrinos from distant astrophysical sources will open a new window on the Universe. The detection principle exploits the measurement of Cherenkov light emitted by charged particles resulting from neutrino interactions in the matter containing the telescope. A novel multi-PMT digital optical module (DOM) was developed to contain 31 3-inch photomultiplier tubes (PMTs). In order to maximize the detector sensitivity, each PMT will be surrounded by an expansion cone which collects photons that would otherwise miss the photocathode. Results for various angles of incidence with respect to the PMT surface indicate an increase in collection efficiency by 30% on average…

A fast algorithm for muon track reconstruction and its application to the ANTARES neutrino telescope.

2011

An algorithm is presented, that provides a fast and robust reconstruction of neutrino induced upward-going muons and a discrimination of these events from downward-going atmospheric muon background in data collected by the ANTARES neutrino telescope. The algorithm consists of a hit merging and hit selection procedure followed by fitting steps for a track hypothesis and a point-like light source. It is particularly well-suited for real time applications such as online monitoring and fast triggering of optical follow-up observations for multi-messenger studies. The performance of the algorithm is evaluated with Monte Carlo simulations and various distributions are compared with that obtained …

Acoustic and optical variations during rapid downward motion episodes in the deep north-western Mediterranean Sea

2011

An Acoustic Doppler Current Profiler (ADCP) was moored at the deep-sea site of the ANTARES neutrino telescope near Toulon, France, thus providing a unique opportunity to compare high-resolution acoustic and optical observations between 70 and 170 m above the sea bed at 2475 m. The ADCP measured downward vertical currents of magnitudes up to 0.03 m s-1 in late winter and early spring 2006. In the same period, observations were made of enhanced levels of acoustic reflection, interpreted as suspended particles including zooplankton, by a factor of about 10 and of horizontal currents reaching 0.35 m s-1. These observations coincided with high light levels detected by the telescope, interpreted …